Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808667.1_cds_XP_016495435.1_9751
CDS Infomation

[gene=LOC107814517] [db_xref=GeneID:107814517] [protein=U4/U6.U5 tri-snRNP-associated protein 2-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016495435.1] [location=complement(join(60282..60378,60501..60672,61642..61813,63142..63357,63441..63608,63683..63868,63977..64061,64213..64457,64920..>64940))] [gbkey=CDS]
Sequence

CTTGATACTGTAAATAGACAGGTATTGGATTTTGACTTTGAGAAATTTTGCTCGGTCTCT
CTCACAAATTTAAATGTGTATGCATGTTTAGTTTGTGGGAAGTATTTCCAAGGAAGGGGC
CCTAAATCCCATGCATATACACACAGTCTTGAAGCAGGGCACCATGTGTATATCAATTTA
CGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTTGAT
GACATTATACACGTGCTGAATCCAAGATTTAACGGGGAGCAGGTTGAACAACTCGATAAG
AGCCGACAATGGTCTAGGGCACTTGATGGGTCTGATTATCTTCCTGGAACGGTTGGGCTG
AATAACATCAAGGAGACTGATTTTGTCAATGTTACGATTCAGTCTTTGATGCGAGTAACT
CCTTTGAGAAACTTCTTTCTTATCCCTGAAAATTATCAACACAGTAGATCTCCTCTTGTT
CATCGATTTGGAGAGCTCACCCGAAAGATTTGGCATGCACGGAACTTTAAGGGACAGGTG
AGTCCGCATGAGTTCTTGCAAGCAGTTATGAAAGCTAGTAAAAAACGTTTTCGGATAGGT
GCACAGTCTGACCCTGTTGAATTTATGTCATGGCTTCTGAATACCCTTCACGCCGAGCTT
AGAACTTCCAAAAAAGGCAGTAGCATAATCCACCGGTGCTTTCAGGGGGAATTGGAGGTT
GTGAAAGAGATGCATAGTAGACCTATTGCAGAAAAGAGGGAGAATGGGGATGCCCCGAAT
AATGGCAATGGGGAAGATGGTCAACATGGATCTCACAATATTGCCATGGAAAGTAGCAGA
ATGCCTTTCTTAATGCTTGGACTCGATTTGCCACCCCCACCTCTTTTTAAAGATGTCATG
GAAAAGAATATTATTCCTCAGGTACCATTATTCAACATACTTAAGAAGTTTGACGGTGAG
ACTGTGACTGAAGTTGTAAGGCCTCGTATAGCGAGGATGAGATACCGTGTAACAAAATTG
CCGCAGTATCTAATTCTCCACATGCGAAGGTTTACAAAGAACAATTTCTTTATGGAGAAA
AATCCGACGCTTGTTAACTTCCCGGTGAAGAATCTAGAGCTCAAGGATTATATTCCTCTG
CCAGCACCAAAGGAGAATGAGAAGCTTCGCTCAAAGTATGATTTGATTGCTAATATTGTT
CATGATGGTAAGCCAGGTGAAGGATCCTACAGGGTGTTTGTCCAACGAAAATCAGAAGAA
CTTTGGTATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAAATGGTTGCACTT
TCTGAGACTTATATGCAGATATATGAGCAGCATCAGCAGTGA

Peptide Sequence

PEP ID

XP_016495435.1
PEP Infomation

PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nicotiana tabacum]
Sequence

MTKKREVEDSMVAEEASPKRQKVIEHSSPSLAPTAFENPLLPLASYDDDDEDDEDDGRRG
HIAEQVINNGGNKEQNGYSYDEEEDEDDEYHGRSQGKRNRAIEIRRDCPYLDTVNRQVLD
FDFEKFCSVSLTNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVYINLRTEKVYCLPD
GYEVIDPSLDDIIHVLNPRFNGEQVEQLDKSRQWSRALDGSDYLPGTVGLNNIKETDFVN
VTIQSLMRVTPLRNFFLIPENYQHSRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVM
KASKKRFRIGAQSDPVEFMSWLLNTLHAELRTSKKGSSIIHRCFQGELEVVKEMHSRPIA
EKRENGDAPNNGNGEDGQHGSHNIAMESSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPL
FNILKKFDGETVTEVVRPRIARMRYRVTKLPQYLILHMRRFTKNNFFMEKNPTLVNFPVK
NLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHV
SETLPQMVALSETYMQIYEQHQQ

Transcript Sequence

Gene sequence data has not been registered.